If present on the system Cockpit can set the SELinux mode to enforcing or permissive. It can also use +setroubleshootd+ to show audit issues and apply suggested fixes.
To perform similar tasks from the command line use the +setenforce+ and +sealert+ tools.
To clear out all the information that +setroubleshootd+ tracks, you can use a commands like:
$ sudo killall setroubleshootd $ sudo rm -rf /var/lib/setroubleshoot/*